Transposable element (TE) subfamilies represent a single entry of a transposable element into an ancestral genome. Here, subfamilies are from the hg19 build of the human genome, as annotated by RepeatMasker (downloaded from the UCSC Genome Browser).
3/6/2019
Transposable element (TE) subfamilies represent a single entry of a transposable element into an ancestral genome. Here, subfamilies are from the hg19 build of the human genome, as annotated by RepeatMasker (downloaded from the UCSC Genome Browser).
The graph displays, for each subfamily, the TE class, number of individual insertions (log scale), average CpG density (log scale), and the proportion of elements that are intergenic.